Pharma

Mundipharma strengthens position in heroin substitution market – Oxbridge Biotech

Mundipharma is leveraging its network of independent companies to invigorate the pain relief and addiction treatment market with the acquisition of a family of patents for opioid substitutes. See my OBR Newsflash for more details. 

Mundipharma strengthens position in heroin substitution market – Oxbridge Biotech

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Illumina breaks the $1,000 genome barrier

(This blog post was first published on Oxbridge Biotech Roundtable Review, January 14, 2014)

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Move aside 23andMe: why spend $99 for a partial genetic profile of currently available disease-associated genes if $1,000 buys your entire genome? On January 14th Illumina, Inc. announced they have created a system to sequence an entire human genome for $1,000. The $1,000 genome has been the carrot on a stick for the DNA sequencing industry for more than a decade and Illumina’s CEO, Jay Flatley, likens the achievement to the breaking of the sound barrier in this statement in the company’s press release:

“With the HiSeq X Ten, we’re delivering the $1,000 genome, reshaping the economics and scale of human genome sequencing, and redefining the possibilities for population-level studies in shaping the future of healthcare. The ability to explore the human genome on this scale will bring the study of cancer and complex diseases to a new level. Breaking the “sound barrier” of human genetics not only pushes us through a psychological milestone, it enables projects of unprecedented scale. We are excited to see what lies on the other side.”

In less than a decade, the price of genome sequencing has gone from $250,000 to $1,000. At this rate, DNA sequencing technology is outpacing Moore’s Law, the governing idea in computer processing that transistor number and, thus, speed double every two years. The breakthrough machine, called HiSeq X Ten, is actually a collection of ten machines with a price tag of $10 million. The collaborative machines can produce “factory scale” sequencing, promising tens of thousands of human genomes per year per lab. The HiSeq X Ten improves upon the currently available HiSeq® 2500 and remains based on Illumina SBS technology. To attain the increase in throughput, Illumina engineered patterned flow cells with billions of nanowells and developed novel, speedier chemistry. This results in a 10X increase in throughput over the HiSeq® 2500.

With the January 14th announcement, Illumina trumped competitors like Pacific Biosciences and Life Technologies, which are also developing faster and cheaper sequencing technologies. Illumina claims the win by calculating the $1,000 per genome cost including instrument depreciation, DNA extraction, library preparation, and estimated labor. This estimation has met with some skepticism but Mick Watson provides a quick math check in a recent blog post that supports Illumina’s assertion.

With a $10 million price tag, the system itself remains out of reach for most institutions, but Macrogen in Seoul, South Korea; The Harvard-MIT Broad Institute in Cambridge, MA; and the Garvan Institute of Medical Research in Sydney, Australia have already purchased systems. The challenge now falls on biomedical researchers to effectively manage the heaps of data that will be generated and to efficiently apply the data to tangible disease research. Foundation Medicine is already planning to use HiSeq X Ten in oncology studies to develop better cancer treatments and Regeneron has partnered with Geisinger Health System to apply the data to improved drug discovery. In general, the implications of a $1,000 genome on the trend toward personalized medicine is generating excitement across the life science industry. Eric Lander, director of The Harvard-MIT Broad Institute, summarized the impact of this technology with, “Over the next few years, we have an opportunity to learn as much about the genetics of human disease as we have learned in the history of medicine.”

Fortunately for companies like 23andMe, the $1,000 genome for the consumer is still some time in the future once provider mark-up and the cost of external sequence analysis and interpretation are taken into account. However, with the current pace of advancement the individual consumer will not have to wait long. 

The extinction of big pharma discovery research

Historically, a PhD biologist leaving academia for industry was expected to send their resume to the large pharmaceutical companies and wait for the storied labs of Merck or Pfizer to decide they needed an expert in their niche field. Today this option is going the way of the dinosaurs as big pharma opts to outsource their discovery research to smaller, external labs and to reallocate their research dollars to innovation hubs. These centers, strategically positioned in technology hotbeds like Silicon Valley, Boston, and Shanghai, seek to identify research, both early- and late-stage, for licensing or acquisition. Most recently Merck announced their intention to followed Pfizer, Johnson & Johnson, and GlaxoSmithKline down this path as covered in my January 10th Oxbridge Biotech Roundtable Newsflash here.

Instead of lamenting the loss of the behemoth pharmaceutical research machine, we should rejoice in the shifting focus to smaller startups that offer PhD scientists more research freedom and allow young scientists to take an active role in the future of the organization; making them more than a pipetting, replaceable cog tethered to a lab bench. However, this paradigm shift to entrepreneurship does come with the disadvantages of lower salaries and less job security, but the opportunities to grow laterally and to find research that engenders passion by choosing from the diverse startup landscape compensates for these losses. Of course the issue of low funding for discovery stage biotech entrepreneurs remains, but perhaps continued change at the top of the foodchain will lead to increased support for early-stage ideas. It is an exciting time in biotech and an exciting time to be a scientist.